Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
Ift88Q61371 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.55□□□□□ -0.08
Ift88Q61371 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Ift88Q61371 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.55□□□□□ -0.08
Ift88Q61371 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ift88Q61371 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Gm5279-201ENSMUST00000199575 745 ntBASIC14.55□□□□□ -0.08
Ift88Q61371 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.55□□□□□ -0.08
Ift88Q61371 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.55□□□□□ -0.08
Ift88Q61371 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ift88Q61371 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.54□□□□□ -0.08
Ift88Q61371 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ift88Q61371 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.54□□□□□ -0.08
Ift88Q61371 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.54□□□□□ -0.08
Ift88Q61371 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.54□□□□□ -0.08
Ift88Q61371 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.54□□□□□ -0.08
Ift88Q61371 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Gm20445-201ENSMUST00000061905 565 ntBASIC14.54□□□□□ -0.08
Ift88Q61371 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.54□□□□□ -0.08
Ift88Q61371 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ift88Q61371 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.54□□□□□ -0.08
Ift88Q61371 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.54□□□□□ -0.08
Ift88Q61371 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.54□□□□□ -0.08
Ift88Q61371 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ift88Q61371 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.54□□□□□ -0.08
Ift88Q61371 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ift88Q61371 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ift88Q61371 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Ift88Q61371 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.54□□□□□ -0.08
Ift88Q61371 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ift88Q61371 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ift88Q61371 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ift88Q61371 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.53□□□□□ -0.08
Ift88Q61371 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ift88Q61371 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.53□□□□□ -0.08
Ift88Q61371 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ift88Q61371 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms