Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.65□□□□□ -0.38
Col12a1Q60847 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.65□□□□□ -0.38
Col12a1Q60847 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm14274-201ENSMUST00000117182 615 ntBASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm14999-201ENSMUST00000121039 624 ntBASIC12.65□□□□□ -0.38
Col12a1Q60847 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.65□□□□□ -0.38
Col12a1Q60847 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.65□□□□□ -0.38
Col12a1Q60847 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.65□□□□□ -0.38
Col12a1Q60847 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.65□□□□□ -0.38
Col12a1Q60847 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Col12a1Q60847 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col12a1Q60847 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col12a1Q60847 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col12a1Q60847 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm8018-201ENSMUST00000173536 789 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col12a1Q60847 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm12501-201ENSMUST00000119163 529 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col12a1Q60847 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.64□□□□□ -0.39
Col12a1Q60847 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col12a1Q60847 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.64□□□□□ -0.39
Col12a1Q60847 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col12a1Q60847 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col12a1Q60847 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm13809-201ENSMUST00000117921 597 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm15036-201ENSMUST00000118880 400 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm1848-201ENSMUST00000120711 789 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm14585-201ENSMUST00000120713 634 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.63□□□□□ -0.39
Col12a1Q60847 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm25201-201ENSMUST00000083093 170 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.63□□□□□ -0.39
Col12a1Q60847 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.63□□□□□ -0.39
Col12a1Q60847 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.63□□□□□ -0.39
Col12a1Q60847 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm37299-201ENSMUST00000193951 826 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.63□□□□□ -0.39
Col12a1Q60847 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col12a1Q60847 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms