Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfaip3Q60769 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.4□□□□□ -0.43
Tnfaip3Q60769 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfaip3Q60769 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.4□□□□□ -0.43
Tnfaip3Q60769 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfaip3Q60769 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm4271-201ENSMUST00000174444 973 ntBASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm27731-201ENSMUST00000185192 107 ntBASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfaip3Q60769 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Gm14660-201ENSMUST00000119809 575 ntBASIC12.38□□□□□ -0.43
Tnfaip3Q60769 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Gm37497-201ENSMUST00000195830 798 ntBASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Gm40466-201ENSMUST00000212174 422 ntBASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfaip3Q60769 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms