Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Gm15590-201ENSMUST00000078419 552 ntBASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gm18737-201ENSMUST00000173594 937 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gm27301-201ENSMUST00000184012 127 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav3-3Q5R1C3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms