Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rc3h1Q4VGL6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm16379-201ENSMUST00000161469 348 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm3890-201ENSMUST00000182416 207 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm8762-201ENSMUST00000193486 339 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rc3h1Q4VGL6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rc3h1Q4VGL6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Gm14723-201ENSMUST00000118686 215 ntBASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.16■□□□□ 0.02
Rc3h1Q4VGL6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms