Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Gm38671-201ENSMUST00000200573 130 ntBASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Gm45384-201ENSMUST00000210451 277 ntBASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl5Q3UTQ8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Gm11978-201ENSMUST00000122315 466 ntBASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl5Q3UTQ8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Gm13612-201ENSMUST00000119276 390 ntBASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Gm7287-201ENSMUST00000205267 602 ntBASIC15.21■□□□□ 0.03
Cdkl5Q3UTQ8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms