Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Mir874-201ENSMUST00000104769 76 ntBASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm9063-201ENSMUST00000223299 582 ntBASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Gm7775-201ENSMUST00000218871 853 ntBASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Gm17872-201ENSMUST00000222550 532 ntBASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa3Q3UPR0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Gm27321-201ENSMUST00000185021 205 ntBASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa3Q3UPR0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms