Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf44Q3UHJ8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Gm24644-201ENSMUST00000157114 139 ntBASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Gm6091-201ENSMUST00000098307 165 ntBASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf44Q3UHJ8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm12203-201ENSMUST00000118235 598 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm12209-201ENSMUST00000120089 596 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm37922-201ENSMUST00000195596 455 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm18187-201ENSMUST00000196476 984 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf44Q3UHJ8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Gm12390-201ENSMUST00000117897 397 ntBASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf44Q3UHJ8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms