Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Mir6546-201ENSMUST00000184460 62 ntBASIC15.38■□□□□ 0.05
Col5a2Q3U962 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.38■□□□□ 0.05
Col5a2Q3U962 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.38■□□□□ 0.05
Col5a2Q3U962 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm13035-201ENSMUST00000117496 342 ntBASIC15.37■□□□□ 0.05
Col5a2Q3U962 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm10051-201ENSMUST00000145209 414 ntBASIC15.37■□□□□ 0.05
Col5a2Q3U962 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Mir6958-201ENSMUST00000184207 73 ntBASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.37■□□□□ 0.05
Col5a2Q3U962 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm19994-201ENSMUST00000217086 586 ntBASIC15.37■□□□□ 0.05
Col5a2Q3U962 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.37■□□□□ 0.05
Col5a2Q3U962 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col5a2Q3U962 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.36■□□□□ 0.05
Col5a2Q3U962 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Gm14644-201ENSMUST00000116671 647 ntBASIC15.36■□□□□ 0.05
Col5a2Q3U962 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.36■□□□□ 0.05
Col5a2Q3U962 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.36■□□□□ 0.05
Col5a2Q3U962 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Col5a2Q3U962 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.35■□□□□ 0.05
Col5a2Q3U962 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.35■□□□□ 0.05
Col5a2Q3U962 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.35■□□□□ 0.05
Col5a2Q3U962 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.35■□□□□ 0.05
Col5a2Q3U962 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Col5a2Q3U962 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col5a2Q3U962 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms