Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Q3KNL4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Q3KNL4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Q3KNL4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.93□□□□□ -0.34
Q3KNL4 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm12403-201ENSMUST00000121384 959 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm27306-201ENSMUST00000183970 107 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.93□□□□□ -0.34
Q3KNL4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.93□□□□□ -0.34
Q3KNL4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.93□□□□□ -0.34
Q3KNL4 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Gm5161-201ENSMUST00000075243 853 ntBASIC12.93□□□□□ -0.34
Q3KNL4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Q3KNL4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Q3KNL4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Q3KNL4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.92□□□□□ -0.34
Q3KNL4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Q3KNL4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.92□□□□□ -0.34
Q3KNL4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Q3KNL4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Q3KNL4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Q3KNL4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.92□□□□□ -0.34
Q3KNL4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.92□□□□□ -0.34
Q3KNL4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.92□□□□□ -0.34
Q3KNL4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.92□□□□□ -0.34
Q3KNL4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Q3KNL4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.92□□□□□ -0.34
Q3KNL4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.92□□□□□ -0.34
Q3KNL4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Q3KNL4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Gm9797-201ENSMUST00000052902 613 ntBASIC12.92□□□□□ -0.34
Q3KNL4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Q3KNL4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Gm24447-201ENSMUST00000083977 338 ntBASIC12.92□□□□□ -0.34
Q3KNL4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Q3KNL4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Q3KNL4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Q3KNL4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Q3KNL4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Q3KNL4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Q3KNL4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Gm15487-201ENSMUST00000122373 465 ntBASIC12.91□□□□□ -0.34
Q3KNL4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Q3KNL4 Mir8102-201ENSMUST00000184148 139 ntBASIC12.91□□□□□ -0.34
Q3KNL4 Gm27838-201ENSMUST00000184829 128 ntBASIC12.91□□□□□ -0.34
Q3KNL4 Gm38144-201ENSMUST00000192790 465 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms