Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm11892-201ENSMUST00000117711 1202 ntBASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm15573-201ENSMUST00000119487 540 ntBASIC18.2■□□□□ 0.5
Trpm1Q2TV84 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm45398-201ENSMUST00000210561 165 ntBASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Gm807-202ENSMUST00000224929 408 ntBASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpm1Q2TV84 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 AC158355.1-201ENSMUST00000215895 1705 ntBASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Gm37246-201ENSMUST00000192665 835 ntBASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpm1Q2TV84 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpm1Q2TV84 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Gm2420-202ENSMUST00000202224 2249 ntBASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Gm16397-201ENSMUST00000122201 494 ntBASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Gm44958-201ENSMUST00000203734 736 ntBASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Gm28719-201ENSMUST00000187779 1757 ntBASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trpm1Q2TV84 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms