Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm12579-201ENSMUST00000118040 783 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm39288-201ENSMUST00000210554 446 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm5780-201ENSMUST00000217774 1834 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm11989-201ENSMUST00000117240 672 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm11362-201ENSMUST00000118838 850 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm16296-201ENSMUST00000159905 325 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm28833-201ENSMUST00000189671 559 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Cacna2d3-208ENSMUST00000225985 918 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 AC164099.1-201ENSMUST00000227780 333 ntBASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ush2AQ2QI47 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm5380-201ENSMUST00000119296 2136 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm11736-201ENSMUST00000121468 505 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm37638-201ENSMUST00000194337 1123 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm15815-201ENSMUST00000120569 255 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm42816-201ENSMUST00000198433 325 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm22920-201ENSMUST00000102175 109 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm8584-201ENSMUST00000171982 758 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Gm26982-201ENSMUST00000182250 1151 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ush2AQ2QI47 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ush2AQ2QI47 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms