Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ptchd3Q0EEE2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.71□□□□□ -0.37
Ptchd3Q0EEE2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ptchd3Q0EEE2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Ptchd3Q0EEE2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm12585-201ENSMUST00000117307 290 ntBASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm12151-201ENSMUST00000121374 290 ntBASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm27989-201ENSMUST00000184721 107 ntBASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ptchd3Q0EEE2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm8927-201ENSMUST00000181978 981 ntBASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Gm3222-201ENSMUST00000071282 990 ntBASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms