Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox9Q04887 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox9Q04887 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox9Q04887 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox9Q04887 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
Sox9Q04887 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox9Q04887 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox9Q04887 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.54□□□□□ -0.24
Sox9Q04887 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox9Q04887 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox9Q04887 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sox9Q04887 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Sox9Q04887 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox9Q04887 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Gm11667-201ENSMUST00000119828 486 ntBASIC13.54□□□□□ -0.24
Sox9Q04887 Gm12266-201ENSMUST00000120311 962 ntBASIC13.54□□□□□ -0.24
Sox9Q04887 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Gm17040-202ENSMUST00000170597 889 ntBASIC13.54□□□□□ -0.24
Sox9Q04887 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox9Q04887 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox9Q04887 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox9Q04887 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.54□□□□□ -0.24
Sox9Q04887 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.54□□□□□ -0.24
Sox9Q04887 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Sox9Q04887 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox9Q04887 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox9Q04887 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox9Q04887 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.54□□□□□ -0.24
Sox9Q04887 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox9Q04887 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox9Q04887 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.53□□□□□ -0.24
Sox9Q04887 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sox9Q04887 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox9Q04887 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.53□□□□□ -0.24
Sox9Q04887 Gm12134-201ENSMUST00000122109 520 ntBASIC13.53□□□□□ -0.24
Sox9Q04887 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox9Q04887 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Sox9Q04887 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox9Q04887 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox9Q04887 Gm45433-201ENSMUST00000209386 247 ntBASIC13.53□□□□□ -0.24
Sox9Q04887 Gm8913-201ENSMUST00000209491 641 ntBASIC13.53□□□□□ -0.24
Sox9Q04887 Gm18730-201ENSMUST00000218038 343 ntBASIC13.53□□□□□ -0.24
Sox9Q04887 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox9Q04887 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.53□□□□□ -0.24
Sox9Q04887 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox9Q04887 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox9Q04887 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms