Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.52□□□□□ -0.09
Col6a1Q04857 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Col6a1Q04857 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a1Q04857 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Col6a1Q04857 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a1Q04857 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm14028-201ENSMUST00000117434 479 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm15770-201ENSMUST00000117498 584 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.51□□□□□ -0.09
Col6a1Q04857 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm19208-201ENSMUST00000213861 912 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a1Q04857 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.51□□□□□ -0.09
Col6a1Q04857 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col6a1Q04857 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a1Q04857 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col6a1Q04857 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.5□□□□□ -0.09
Col6a1Q04857 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.5□□□□□ -0.09
Col6a1Q04857 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.5□□□□□ -0.09
Col6a1Q04857 Gm5781-201ENSMUST00000219792 443 ntBASIC14.5□□□□□ -0.09
Col6a1Q04857 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.5□□□□□ -0.09
Col6a1Q04857 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a1Q04857 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms