Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm18473-201ENSMUST00000220543 868 ntBASIC13.36□□□□□ -0.27
Gabpb1Q00420 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.36□□□□□ -0.27
Gabpb1Q00420 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Gm6152-201ENSMUST00000151704 340 ntBASIC13.35□□□□□ -0.27
Gabpb1Q00420 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.35□□□□□ -0.27
Gabpb1Q00420 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.35□□□□□ -0.27
Gabpb1Q00420 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.35□□□□□ -0.27
Gabpb1Q00420 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabpb1Q00420 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Gm14350-201ENSMUST00000116642 640 ntBASIC13.34□□□□□ -0.27
Gabpb1Q00420 Gm11978-201ENSMUST00000122315 466 ntBASIC13.34□□□□□ -0.27
Gabpb1Q00420 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.34□□□□□ -0.27
Gabpb1Q00420 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms