Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Scn1bP97952 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Scn1bP97952 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn1bP97952 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.01□□□□□ -0.49
Scn1bP97952 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn1bP97952 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.01□□□□□ -0.49
Scn1bP97952 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn1bP97952 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.01□□□□□ -0.49
Scn1bP97952 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12□□□□□ -0.49
Scn1bP97952 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Gm18737-201ENSMUST00000173594 937 ntBASIC12□□□□□ -0.49
Scn1bP97952 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12□□□□□ -0.49
Scn1bP97952 Gm18057-201ENSMUST00000208220 503 ntBASIC12□□□□□ -0.49
Scn1bP97952 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 AC166341.4-201ENSMUST00000220625 123 ntBASIC12□□□□□ -0.49
Scn1bP97952 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12□□□□□ -0.49
Scn1bP97952 AC155252.2-201ENSMUST00000226946 680 ntBASIC12□□□□□ -0.49
Scn1bP97952 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Scn1bP97952 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Gm6018-201ENSMUST00000216090 1306 ntBASIC12□□□□□ -0.49
Scn1bP97952 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12□□□□□ -0.49
Scn1bP97952 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scn1bP97952 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Gm7104-201ENSMUST00000179741 2532 ntBASIC12□□□□□ -0.49
Scn1bP97952 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scn1bP97952 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.99□□□□□ -0.49
Scn1bP97952 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.99□□□□□ -0.49
Scn1bP97952 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.99□□□□□ -0.49
Scn1bP97952 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.99□□□□□ -0.49
Scn1bP97952 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Scn1bP97952 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Scn1bP97952 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.99□□□□□ -0.49
Scn1bP97952 AA543401-201ENSMUST00000164248 1269 ntBASIC11.99□□□□□ -0.49
Scn1bP97952 Gm18027-201ENSMUST00000218947 619 ntBASIC11.99□□□□□ -0.49
Scn1bP97952 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.99□□□□□ -0.49
Scn1bP97952 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.99□□□□□ -0.49
Scn1bP97952 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Scn1bP97952 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn1bP97952 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Scn1bP97952 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms