Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.14□□□□□ -0.47
Cacna1aP97445 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.14□□□□□ -0.47
Cacna1aP97445 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.14□□□□□ -0.47
Cacna1aP97445 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.13□□□□□ -0.47
Cacna1aP97445 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm13665-201ENSMUST00000120830 528 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm19459-201ENSMUST00000176240 835 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm16397-201ENSMUST00000122201 494 ntBASIC12.13□□□□□ -0.47
Cacna1aP97445 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Cacna1aP97445 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cacna1aP97445 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm25214-201ENSMUST00000104573 129 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm13570-201ENSMUST00000140763 309 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm5950-201ENSMUST00000213337 772 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms