Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SgcaP82350 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
SgcaP82350 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcaP82350 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SgcaP82350 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.02□□□□□ -0.64
SgcaP82350 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcaP82350 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.02□□□□□ -0.64
SgcaP82350 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SgcaP82350 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.02□□□□□ -0.65
SgcaP82350 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.02□□□□□ -0.65
SgcaP82350 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.02□□□□□ -0.65
SgcaP82350 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.02□□□□□ -0.65
SgcaP82350 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SgcaP82350 Gm17271-201ENSMUST00000165535 355 ntBASIC11.02□□□□□ -0.65
SgcaP82350 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
SgcaP82350 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.02□□□□□ -0.65
SgcaP82350 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.02□□□□□ -0.65
SgcaP82350 Gm18057-201ENSMUST00000208220 503 ntBASIC11.02□□□□□ -0.65
SgcaP82350 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.02□□□□□ -0.65
SgcaP82350 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.02□□□□□ -0.65
SgcaP82350 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.02□□□□□ -0.65
SgcaP82350 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SgcaP82350 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SgcaP82350 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SgcaP82350 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SgcaP82350 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcaP82350 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SgcaP82350 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.01□□□□□ -0.65
SgcaP82350 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.01□□□□□ -0.65
SgcaP82350 Gm15678-201ENSMUST00000117573 960 ntBASIC11.01□□□□□ -0.65
SgcaP82350 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.01□□□□□ -0.65
SgcaP82350 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Gm1401-201ENSMUST00000122048 772 ntBASIC11.01□□□□□ -0.65
SgcaP82350 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
SgcaP82350 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SgcaP82350 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.01□□□□□ -0.65
SgcaP82350 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.01□□□□□ -0.65
SgcaP82350 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.01□□□□□ -0.65
SgcaP82350 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.01□□□□□ -0.65
SgcaP82350 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.01□□□□□ -0.65
SgcaP82350 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.01□□□□□ -0.65
SgcaP82350 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms