Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcdP82347 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcdP82347 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcdP82347 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.23□□□□□ -0.45
SgcdP82347 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SgcdP82347 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.23□□□□□ -0.45
SgcdP82347 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcdP82347 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.22□□□□□ -0.45
SgcdP82347 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SgcdP82347 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
SgcdP82347 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcdP82347 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.22□□□□□ -0.45
SgcdP82347 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.22□□□□□ -0.45
SgcdP82347 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
SgcdP82347 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Gm25144-201ENSMUST00000179561 110 ntBASIC12.22□□□□□ -0.45
SgcdP82347 Gm25352-201ENSMUST00000179815 110 ntBASIC12.22□□□□□ -0.45
SgcdP82347 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Gm44719-201ENSMUST00000206404 149 ntBASIC12.22□□□□□ -0.45
SgcdP82347 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcdP82347 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.21□□□□□ -0.45
SgcdP82347 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.21□□□□□ -0.45
SgcdP82347 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Gm7488-201ENSMUST00000117148 684 ntBASIC12.21□□□□□ -0.45
SgcdP82347 Gm14767-201ENSMUST00000121559 586 ntBASIC12.21□□□□□ -0.45
SgcdP82347 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.21□□□□□ -0.45
SgcdP82347 Gm29741-201ENSMUST00000192667 421 ntBASIC12.21□□□□□ -0.45
SgcdP82347 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SgcdP82347 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.21□□□□□ -0.45
SgcdP82347 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.21□□□□□ -0.45
SgcdP82347 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SgcdP82347 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.21□□□□□ -0.45
SgcdP82347 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SgcdP82347 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcdP82347 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.21□□□□□ -0.45
SgcdP82347 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.21□□□□□ -0.46
SgcdP82347 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcdP82347 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcdP82347 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
SgcdP82347 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SgcdP82347 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SgcdP82347 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SgcdP82347 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcdP82347 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcdP82347 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.21□□□□□ -0.46
SgcdP82347 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SgcdP82347 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcdP82347 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SgcdP82347 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcdP82347 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SgcdP82347 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.21□□□□□ -0.46
SgcdP82347 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.2□□□□□ -0.46
SgcdP82347 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcdP82347 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms