Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Stra8P70278 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Stra8P70278 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Stra8P70278 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC18.17■□□□□ 0.5
Stra8P70278 Gm13385-201ENSMUST00000121089 220 ntBASIC18.17■□□□□ 0.5
Stra8P70278 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Stra8P70278 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.17■□□□□ 0.5
Stra8P70278 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.17■□□□□ 0.5
Stra8P70278 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.17■□□□□ 0.5
Stra8P70278 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Syt7-204ENSMUST00000223586 1344 ntBASIC18.17■□□□□ 0.5
Stra8P70278 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Stra8P70278 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Stra8P70278 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Stra8P70278 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC18.16■□□□□ 0.5
Stra8P70278 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.16■□□□□ 0.5
Stra8P70278 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.16■□□□□ 0.5
Stra8P70278 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Stra8P70278 Gm5989-201ENSMUST00000096092 2077 ntBASIC18.16■□□□□ 0.5
Stra8P70278 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Stra8P70278 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Gm24420-201ENSMUST00000176676 59 ntBASIC18.16■□□□□ 0.5
Stra8P70278 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.16■□□□□ 0.5
Stra8P70278 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.16■□□□□ 0.5
Stra8P70278 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stra8P70278 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Stra8P70278 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Stra8P70278 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.15■□□□□ 0.5
Stra8P70278 Gm42480-201ENSMUST00000198434 2595 ntBASIC18.15■□□□□ 0.5
Stra8P70278 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.15■□□□□ 0.5
Stra8P70278 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.15■□□□□ 0.5
Stra8P70278 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Stra8P70278 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.15■□□□□ 0.5
Stra8P70278 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Stra8P70278 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stra8P70278 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Stra8P70278 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Stra8P70278 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Stra8P70278 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Stra8P70278 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Stra8P70278 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.14■□□□□ 0.49
Stra8P70278 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.14■□□□□ 0.49
Stra8P70278 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stra8P70278 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.14■□□□□ 0.49
Stra8P70278 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms