Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.98□□□□□ -0.65
Pdlim4P70271 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.98□□□□□ -0.65
Pdlim4P70271 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.98□□□□□ -0.65
Pdlim4P70271 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pdlim4P70271 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.97□□□□□ -0.65
Pdlim4P70271 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm15678-201ENSMUST00000117573 960 ntBASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm11478-201ENSMUST00000117851 599 ntBASIC10.97□□□□□ -0.65
Pdlim4P70271 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.97□□□□□ -0.65
Pdlim4P70271 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.97□□□□□ -0.65
Pdlim4P70271 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.97□□□□□ -0.65
Pdlim4P70271 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pdlim4P70271 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.97□□□□□ -0.65
Pdlim4P70271 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pdlim4P70271 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Pdlim4P70271 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pdlim4P70271 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pdlim4P70271 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pdlim4P70271 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.65
Pdlim4P70271 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.96□□□□□ -0.65
Pdlim4P70271 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Gm12928-201ENSMUST00000117115 573 ntBASIC10.96□□□□□ -0.65
Pdlim4P70271 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.96□□□□□ -0.65
Pdlim4P70271 Gm12138-201ENSMUST00000122180 951 ntBASIC10.96□□□□□ -0.65
Pdlim4P70271 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.96□□□□□ -0.65
Pdlim4P70271 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Pdlim4P70271 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pdlim4P70271 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pdlim4P70271 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.96□□□□□ -0.66
Pdlim4P70271 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.96□□□□□ -0.66
Pdlim4P70271 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Pdlim4P70271 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Pdlim4P70271 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdlim4P70271 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms