Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
ThraP63058 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.34□□□□□ -0.27
ThraP63058 Mir1982-201ENSMUST00000157368 74 ntBASIC13.34□□□□□ -0.27
ThraP63058 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ThraP63058 Gm27486-201ENSMUST00000184923 80 ntBASIC13.34□□□□□ -0.27
ThraP63058 Gm29741-201ENSMUST00000192667 421 ntBASIC13.34□□□□□ -0.27
ThraP63058 Gm43630-201ENSMUST00000201550 776 ntBASIC13.34□□□□□ -0.27
ThraP63058 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.34□□□□□ -0.27
ThraP63058 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.34□□□□□ -0.27
ThraP63058 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.34□□□□□ -0.27
ThraP63058 Mir497b-201ENSMUST00000093601 125 ntBASIC13.34□□□□□ -0.27
ThraP63058 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ThraP63058 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.34□□□□□ -0.27
ThraP63058 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.34□□□□□ -0.27
ThraP63058 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ThraP63058 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ThraP63058 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ThraP63058 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ThraP63058 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.34□□□□□ -0.27
ThraP63058 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ThraP63058 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ThraP63058 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ThraP63058 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ThraP63058 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ThraP63058 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ThraP63058 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ThraP63058 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.33□□□□□ -0.28
ThraP63058 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Gm12928-201ENSMUST00000117115 573 ntBASIC13.33□□□□□ -0.28
ThraP63058 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
ThraP63058 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.33□□□□□ -0.28
ThraP63058 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ThraP63058 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.33□□□□□ -0.28
ThraP63058 Gm7287-201ENSMUST00000205267 602 ntBASIC13.33□□□□□ -0.28
ThraP63058 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.33□□□□□ -0.28
ThraP63058 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.33□□□□□ -0.28
ThraP63058 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.33□□□□□ -0.28
ThraP63058 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ThraP63058 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ThraP63058 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ThraP63058 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.32□□□□□ -0.28
ThraP63058 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ThraP63058 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.32□□□□□ -0.28
ThraP63058 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.32□□□□□ -0.28
ThraP63058 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.32□□□□□ -0.28
ThraP63058 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ThraP63058 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms