Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.6□□□□□ -0.55
Sec61a1P61620 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Gm12585-201ENSMUST00000117307 290 ntBASIC11.6□□□□□ -0.55
Sec61a1P61620 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.6□□□□□ -0.55
Sec61a1P61620 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Gm10766-202ENSMUST00000194123 606 ntBASIC11.6□□□□□ -0.55
Sec61a1P61620 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.6□□□□□ -0.55
Sec61a1P61620 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Gm9797-201ENSMUST00000052902 613 ntBASIC11.6□□□□□ -0.55
Sec61a1P61620 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sec61a1P61620 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61a1P61620 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.6□□□□□ -0.55
Sec61a1P61620 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.59□□□□□ -0.55
Sec61a1P61620 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sec61a1P61620 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.59□□□□□ -0.55
Sec61a1P61620 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Sec61a1P61620 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.59□□□□□ -0.55
Sec61a1P61620 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.59□□□□□ -0.55
Sec61a1P61620 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.59□□□□□ -0.55
Sec61a1P61620 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Gm21854-201ENSMUST00000179901 471 ntBASIC11.59□□□□□ -0.55
Sec61a1P61620 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.59□□□□□ -0.55
Sec61a1P61620 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.59□□□□□ -0.55
Sec61a1P61620 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.59□□□□□ -0.55
Sec61a1P61620 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.59□□□□□ -0.55
Sec61a1P61620 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.59□□□□□ -0.55
Sec61a1P61620 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a1P61620 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a1P61620 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sec61a1P61620 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61a1P61620 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm11424-201ENSMUST00000121929 829 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms