Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC17.63■□□□□ 0.41
Nphp4P59240 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.63■□□□□ 0.41
Nphp4P59240 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nphp4P59240 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC17.62■□□□□ 0.41
Nphp4P59240 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Nphp4P59240 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Gm14832-201ENSMUST00000121289 322 ntBASIC17.62■□□□□ 0.41
Nphp4P59240 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.62■□□□□ 0.41
Nphp4P59240 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC17.62■□□□□ 0.41
Nphp4P59240 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp4P59240 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nphp4P59240 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Nphp4P59240 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.61■□□□□ 0.41
Nphp4P59240 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.61■□□□□ 0.41
Nphp4P59240 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.61■□□□□ 0.41
Nphp4P59240 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nphp4P59240 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nphp4P59240 Gm12314-201ENSMUST00000118104 538 ntBASIC17.61■□□□□ 0.41
Nphp4P59240 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.61■□□□□ 0.41
Nphp4P59240 Gm13570-201ENSMUST00000140763 309 ntBASIC17.61■□□□□ 0.41
Nphp4P59240 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC17.61■□□□□ 0.41
Nphp4P59240 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Gm3096-201ENSMUST00000185770 364 ntBASIC17.61■□□□□ 0.41
Nphp4P59240 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.61■□□□□ 0.41
Nphp4P59240 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Gm2673-201ENSMUST00000120958 1608 ntBASIC17.61■□□□□ 0.41
Nphp4P59240 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nphp4P59240 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nphp4P59240 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Nphp4P59240 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Nphp4P59240 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.6■□□□□ 0.41
Nphp4P59240 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Nphp4P59240 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.6■□□□□ 0.41
Nphp4P59240 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC17.6■□□□□ 0.41
Nphp4P59240 Gm27046-201ENSMUST00000182160 463 ntBASIC17.6■□□□□ 0.41
Nphp4P59240 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.6■□□□□ 0.41
Nphp4P59240 Gm44967-201ENSMUST00000207047 631 ntBASIC17.6■□□□□ 0.41
Nphp4P59240 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.6■□□□□ 0.41
Nphp4P59240 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC17.6■□□□□ 0.41
Nphp4P59240 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nphp4P59240 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nphp4P59240 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms