Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.16□□□□□ -0.3
Lim2P56563 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Lim2P56563 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.16□□□□□ -0.3
Lim2P56563 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lim2P56563 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Gm24196-201ENSMUST00000179161 110 ntBASIC13.16□□□□□ -0.3
Lim2P56563 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lim2P56563 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.16□□□□□ -0.3
Lim2P56563 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lim2P56563 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lim2P56563 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lim2P56563 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Lim2P56563 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Lim2P56563 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.15□□□□□ -0.3
Lim2P56563 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lim2P56563 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gm14350-201ENSMUST00000116642 640 ntBASIC13.15□□□□□ -0.3
Lim2P56563 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gm8810-201ENSMUST00000172895 754 ntBASIC13.15□□□□□ -0.3
Lim2P56563 Gm7561-201ENSMUST00000211203 886 ntBASIC13.15□□□□□ -0.3
Lim2P56563 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.15□□□□□ -0.3
Lim2P56563 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.15□□□□□ -0.3
Lim2P56563 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gm6091-201ENSMUST00000098307 165 ntBASIC13.15□□□□□ -0.3
Lim2P56563 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Lim2P56563 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.15□□□□□ -0.3
Lim2P56563 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lim2P56563 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lim2P56563 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.14□□□□□ -0.31
Lim2P56563 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Gm12390-201ENSMUST00000117897 397 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Gm8213-201ENSMUST00000118191 441 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.14□□□□□ -0.31
Lim2P56563 Gm15824-201ENSMUST00000119516 955 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Gm10156-201ENSMUST00000122364 462 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.14□□□□□ -0.31
Lim2P56563 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Gm6266-201ENSMUST00000203844 806 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lim2P56563 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.14□□□□□ -0.31
Lim2P56563 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.14□□□□□ -0.31
Lim2P56563 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.14□□□□□ -0.31
Lim2P56563 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lim2P56563 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lim2P56563 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lim2P56563 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Lim2P56563 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lim2P56563 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lim2P56563 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lim2P56563 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Lim2P56563 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lim2P56563 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lim2P56563 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Lim2P56563 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lim2P56563 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lim2P56563 Gm13829-201ENSMUST00000119600 138 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms