Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.98□□□□□ -0.65
Cks2P56390 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Cks2P56390 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.98□□□□□ -0.65
Cks2P56390 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cks2P56390 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cks2P56390 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Cks2P56390 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm12403-201ENSMUST00000121384 959 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cks2P56390 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cks2P56390 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Gm6888-201ENSMUST00000221983 706 ntBASIC10.97□□□□□ -0.65
Cks2P56390 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.97□□□□□ -0.65
Cks2P56390 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cks2P56390 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cks2P56390 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Cks2P56390 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cks2P56390 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.97□□□□□ -0.65
Cks2P56390 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks2P56390 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cks2P56390 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks2P56390 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.96□□□□□ -0.65
Cks2P56390 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks2P56390 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks2P56390 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cks2P56390 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cks2P56390 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks2P56390 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks2P56390 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.96□□□□□ -0.65
Cks2P56390 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Cks2P56390 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks2P56390 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cks2P56390 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms