Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdh11P55288 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdh11P55288 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdh11P55288 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdh11P55288 Gm18624-201ENSMUST00000220966 658 ntBASIC12.01□□□□□ -0.49
Cdh11P55288 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Cdh11P55288 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh11P55288 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdh11P55288 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh11P55288 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdh11P55288 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdh11P55288 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdh11P55288 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Gm14452-201ENSMUST00000118680 1632 ntBASIC12□□□□□ -0.49
Cdh11P55288 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdh11P55288 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12□□□□□ -0.49
Cdh11P55288 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12□□□□□ -0.49
Cdh11P55288 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdh11P55288 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cdh11P55288 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12□□□□□ -0.49
Cdh11P55288 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12□□□□□ -0.49
Cdh11P55288 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12□□□□□ -0.49
Cdh11P55288 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12□□□□□ -0.49
Cdh11P55288 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12□□□□□ -0.49
Cdh11P55288 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12□□□□□ -0.49
Cdh11P55288 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12□□□□□ -0.49
Cdh11P55288 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Gm45668-201ENSMUST00000211271 493 ntBASIC12□□□□□ -0.49
Cdh11P55288 AC154687.2-201ENSMUST00000223853 640 ntBASIC12□□□□□ -0.49
Cdh11P55288 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cdh11P55288 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12□□□□□ -0.49
Cdh11P55288 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdh11P55288 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12□□□□□ -0.49
Cdh11P55288 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Cdh11P55288 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh11P55288 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdh11P55288 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh11P55288 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.99□□□□□ -0.49
Cdh11P55288 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Cdh11P55288 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh11P55288 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdh11P55288 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.99□□□□□ -0.49
Cdh11P55288 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms