Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm27839-201ENSMUST00000184242 106 ntBASIC13.01□□□□□ -0.33
Pdx1P52946 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.01□□□□□ -0.33
Pdx1P52946 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.01□□□□□ -0.33
Pdx1P52946 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.01□□□□□ -0.33
Pdx1P52946 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdx1P52946 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pdx1P52946 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.01□□□□□ -0.33
Pdx1P52946 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdx1P52946 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Gm43364-201ENSMUST00000196046 3274 ntBASIC13□□□□□ -0.33
Pdx1P52946 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13□□□□□ -0.33
Pdx1P52946 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pdx1P52946 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Gm10156-201ENSMUST00000122364 462 ntBASIC13□□□□□ -0.33
Pdx1P52946 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pdx1P52946 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdx1P52946 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdx1P52946 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.99□□□□□ -0.33
Pdx1P52946 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.99□□□□□ -0.33
Pdx1P52946 Gm11814-201ENSMUST00000119515 929 ntBASIC12.99□□□□□ -0.33
Pdx1P52946 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Gm24196-201ENSMUST00000179161 110 ntBASIC12.99□□□□□ -0.33
Pdx1P52946 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.99□□□□□ -0.33
Pdx1P52946 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.99□□□□□ -0.33
Pdx1P52946 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.99□□□□□ -0.33
Pdx1P52946 Gm16372-201ENSMUST00000073088 450 ntBASIC12.99□□□□□ -0.33
Pdx1P52946 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.99□□□□□ -0.33
Pdx1P52946 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Pdx1P52946 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdx1P52946 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.98□□□□□ -0.33
Pdx1P52946 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms