Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.31□□□□□ -0.28
Lhx3P50481 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.31□□□□□ -0.28
Lhx3P50481 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.31□□□□□ -0.28
Lhx3P50481 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.31□□□□□ -0.28
Lhx3P50481 Gm19163-201ENSMUST00000223313 780 ntBASIC13.31□□□□□ -0.28
Lhx3P50481 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Lhx3P50481 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.31□□□□□ -0.28
Lhx3P50481 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lhx3P50481 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Lhx3P50481 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lhx3P50481 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lhx3P50481 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Lhx3P50481 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Snord83b-201ENSMUST00000104546 94 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Lhx3P50481 Gm12957-201ENSMUST00000117835 377 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.3□□□□□ -0.28
Lhx3P50481 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.3□□□□□ -0.28
Lhx3P50481 Gm17208-201ENSMUST00000168388 535 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Gm37424-201ENSMUST00000191727 561 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Gm18041-201ENSMUST00000218210 618 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Lhx3P50481 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.3□□□□□ -0.28
Lhx3P50481 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lhx3P50481 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lhx3P50481 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lhx3P50481 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lhx3P50481 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.29□□□□□ -0.28
Lhx3P50481 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Gm22121-201ENSMUST00000175148 54 ntBASIC13.29□□□□□ -0.28
Lhx3P50481 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.29□□□□□ -0.28
Lhx3P50481 Gm4768-201ENSMUST00000206199 686 ntBASIC13.29□□□□□ -0.28
Lhx3P50481 Gm32025-201ENSMUST00000217960 307 ntBASIC13.29□□□□□ -0.28
Lhx3P50481 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Lhx3P50481 Snora73a-201ENSMUST00000082453 205 ntBASIC13.29□□□□□ -0.28
Lhx3P50481 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.29□□□□□ -0.28
Lhx3P50481 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.29□□□□□ -0.28
Lhx3P50481 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lhx3P50481 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.28□□□□□ -0.28
Lhx3P50481 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx3P50481 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx3P50481 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx3P50481 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms