Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.89□□□□□ -0.19
Shmt1P50431 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.89□□□□□ -0.19
Shmt1P50431 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Shmt1P50431 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.89□□□□□ -0.19
Shmt1P50431 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.89□□□□□ -0.19
Shmt1P50431 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.89□□□□□ -0.19
Shmt1P50431 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.89□□□□□ -0.19
Shmt1P50431 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shmt1P50431 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Shmt1P50431 Gm10268-201ENSMUST00000085340 555 ntBASIC13.89□□□□□ -0.19
Shmt1P50431 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.89□□□□□ -0.19
Shmt1P50431 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Shmt1P50431 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Shmt1P50431 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shmt1P50431 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Shmt1P50431 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Shmt1P50431 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Shmt1P50431 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.88□□□□□ -0.19
Shmt1P50431 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.88□□□□□ -0.19
Shmt1P50431 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.88□□□□□ -0.19
Shmt1P50431 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Shmt1P50431 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.88□□□□□ -0.19
Shmt1P50431 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Shmt1P50431 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.88□□□□□ -0.19
Shmt1P50431 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Shmt1P50431 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Gm26927-201ENSMUST00000182385 965 ntBASIC13.88□□□□□ -0.19
Shmt1P50431 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Gm6458-201ENSMUST00000211573 635 ntBASIC13.88□□□□□ -0.19
Shmt1P50431 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.88□□□□□ -0.19
Shmt1P50431 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.88□□□□□ -0.19
Shmt1P50431 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.88□□□□□ -0.19
Shmt1P50431 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shmt1P50431 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shmt1P50431 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.88□□□□□ -0.19
Shmt1P50431 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.88□□□□□ -0.19
Shmt1P50431 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.88□□□□□ -0.19
Shmt1P50431 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Shmt1P50431 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shmt1P50431 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.88□□□□□ -0.19
Shmt1P50431 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.87□□□□□ -0.19
Shmt1P50431 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Shmt1P50431 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Shmt1P50431 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Shmt1P50431 Mir686-201ENSMUST00000102174 109 ntBASIC13.87□□□□□ -0.19
Shmt1P50431 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.87□□□□□ -0.19
Shmt1P50431 Gm2231-201ENSMUST00000125661 612 ntBASIC13.87□□□□□ -0.19
Shmt1P50431 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shmt1P50431 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms