Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gm9719-201ENSMUST00000162765 543 ntBASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gm10253-201ENSMUST00000194270 940 ntBASIC10.9□□□□□ -0.66
Nkx2-1P50220 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gm45841-201ENSMUST00000207700 164 ntBASIC10.9□□□□□ -0.66
Nkx2-1P50220 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.9□□□□□ -0.66
Nkx2-1P50220 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx2-1P50220 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx2-1P50220 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm5566-201ENSMUST00000116118 459 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm13015-201ENSMUST00000118674 204 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm13385-201ENSMUST00000121089 220 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm27702-201ENSMUST00000184512 56 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm21470-201ENSMUST00000187680 696 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Gm5312-201ENSMUST00000203728 547 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Dupd1-202ENSMUST00000224735 548 ntBASIC10.89□□□□□ -0.67
Nkx2-1P50220 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-1P50220 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms