Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.76□□□□□ -0.37
Hnf4aP49698 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hnf4aP49698 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hnf4aP49698 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.76□□□□□ -0.37
Hnf4aP49698 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hnf4aP49698 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hnf4aP49698 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hnf4aP49698 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.75□□□□□ -0.37
Hnf4aP49698 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Hnf4aP49698 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Mir6392-201ENSMUST00000184924 108 ntBASIC12.75□□□□□ -0.37
Hnf4aP49698 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.75□□□□□ -0.37
Hnf4aP49698 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.75□□□□□ -0.37
Hnf4aP49698 Gm19931-201ENSMUST00000198920 368 ntBASIC12.75□□□□□ -0.37
Hnf4aP49698 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.75□□□□□ -0.37
Hnf4aP49698 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Gm6983-201ENSMUST00000214912 628 ntBASIC12.75□□□□□ -0.37
Hnf4aP49698 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.75□□□□□ -0.37
Hnf4aP49698 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.75□□□□□ -0.37
Hnf4aP49698 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hnf4aP49698 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.74□□□□□ -0.37
Hnf4aP49698 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.74□□□□□ -0.37
Hnf4aP49698 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hnf4aP49698 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Hnf4aP49698 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm44397-201ENSMUST00000195950 113 ntBASIC12.74□□□□□ -0.37
Hnf4aP49698 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.74□□□□□ -0.37
Hnf4aP49698 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.74□□□□□ -0.37
Hnf4aP49698 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm15823-201ENSMUST00000064305 670 ntBASIC12.74□□□□□ -0.37
Hnf4aP49698 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hnf4aP49698 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.74□□□□□ -0.37
Hnf4aP49698 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hnf4aP49698 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hnf4aP49698 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hnf4aP49698 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms