Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rfx3P48381 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfx3P48381 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rfx3P48381 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rfx3P48381 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rfx3P48381 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.89□□□□□ -0.51
Rfx3P48381 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.89□□□□□ -0.51
Rfx3P48381 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Gm14719-201ENSMUST00000121891 340 ntBASIC11.89□□□□□ -0.51
Rfx3P48381 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.89□□□□□ -0.51
Rfx3P48381 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Gm17330-201ENSMUST00000221047 165 ntBASIC11.89□□□□□ -0.51
Rfx3P48381 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.89□□□□□ -0.51
Rfx3P48381 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.89□□□□□ -0.51
Rfx3P48381 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Pck2-205ENSMUST00000226352 2784 ntBASIC11.89□□□□□ -0.51
Rfx3P48381 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rfx3P48381 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfx3P48381 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rfx3P48381 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.88□□□□□ -0.51
Rfx3P48381 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rfx3P48381 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rfx3P48381 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Gm24694-201ENSMUST00000180054 110 ntBASIC11.88□□□□□ -0.51
Rfx3P48381 Gm27663-201ENSMUST00000184839 110 ntBASIC11.88□□□□□ -0.51
Rfx3P48381 Mir6977-201ENSMUST00000184960 64 ntBASIC11.88□□□□□ -0.51
Rfx3P48381 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
Rfx3P48381 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.88□□□□□ -0.51
Rfx3P48381 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rfx3P48381 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rfx3P48381 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Rfx3P48381 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rfx3P48381 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rfx3P48381 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rfx3P48381 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.87□□□□□ -0.51
Rfx3P48381 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms