Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox18P43680 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox18P43680 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Sox18P43680 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Sox18P43680 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox18P43680 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox18P43680 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Gm24548-201ENSMUST00000158650 108 ntBASIC12.69□□□□□ -0.38
Sox18P43680 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.69□□□□□ -0.38
Sox18P43680 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Gm38217-201ENSMUST00000194358 910 ntBASIC12.69□□□□□ -0.38
Sox18P43680 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox18P43680 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox18P43680 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.69□□□□□ -0.38
Sox18P43680 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox18P43680 AC154252.1-201ENSMUST00000226041 473 ntBASIC12.69□□□□□ -0.38
Sox18P43680 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.69□□□□□ -0.38
Sox18P43680 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.69□□□□□ -0.38
Sox18P43680 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sox18P43680 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.69□□□□□ -0.38
Sox18P43680 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox18P43680 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 Gm14130-201ENSMUST00000118417 987 ntBASIC12.68□□□□□ -0.38
Sox18P43680 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox18P43680 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Gm37017-201ENSMUST00000195266 747 ntBASIC12.68□□□□□ -0.38
Sox18P43680 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.68□□□□□ -0.38
Sox18P43680 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.68□□□□□ -0.38
Sox18P43680 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.68□□□□□ -0.38
Sox18P43680 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Gm13097-201ENSMUST00000210722 397 ntBASIC12.68□□□□□ -0.38
Sox18P43680 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.68□□□□□ -0.38
Sox18P43680 AC129597.1-201ENSMUST00000223046 1234 ntBASIC12.68□□□□□ -0.38
Sox18P43680 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox18P43680 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox18P43680 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox18P43680 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox18P43680 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox18P43680 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox18P43680 Gm8872-201ENSMUST00000197475 1341 ntBASIC12.67□□□□□ -0.38
Sox18P43680 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms