Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh2P43247 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.56□□□□□ -0.24
Msh2P43247 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Msh2P43247 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.56□□□□□ -0.24
Msh2P43247 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Msh2P43247 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Msh2P43247 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Msh2P43247 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Msh2P43247 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Msh2P43247 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.56□□□□□ -0.24
Msh2P43247 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Msh2P43247 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Msh2P43247 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Msh2P43247 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Msh2P43247 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.56□□□□□ -0.24
Msh2P43247 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh2P43247 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Msh2P43247 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.55□□□□□ -0.24
Msh2P43247 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.55□□□□□ -0.24
Msh2P43247 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.55□□□□□ -0.24
Msh2P43247 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Msh2P43247 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Msh2P43247 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.54□□□□□ -0.24
Msh2P43247 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Msh2P43247 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Msh2P43247 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Msh2P43247 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.54□□□□□ -0.24
Msh2P43247 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Msh2P43247 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms