Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.45□□□□□ -0.42
Cdx2P43241 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdx2P43241 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdx2P43241 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdx2P43241 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdx2P43241 Gm19208-201ENSMUST00000213861 912 ntBASIC12.45□□□□□ -0.42
Cdx2P43241 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.45□□□□□ -0.42
Cdx2P43241 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx2P43241 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx2P43241 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.44□□□□□ -0.42
Cdx2P43241 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdx2P43241 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx2P43241 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.43□□□□□ -0.42
Cdx2P43241 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdx2P43241 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdx2P43241 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.43□□□□□ -0.42
Cdx2P43241 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdx2P43241 Gm13875-201ENSMUST00000120162 282 ntBASIC12.43□□□□□ -0.42
Cdx2P43241 Gm15547-201ENSMUST00000122152 333 ntBASIC12.43□□□□□ -0.42
Cdx2P43241 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 Gm27046-201ENSMUST00000182160 463 ntBASIC12.43□□□□□ -0.42
Cdx2P43241 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.43□□□□□ -0.42
Cdx2P43241 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdx2P43241 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms