Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.05□□□□□ -0.48
Nkx2-2P42586 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Mir686-201ENSMUST00000102174 109 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm11814-201ENSMUST00000119515 929 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm8810-201ENSMUST00000172895 754 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm24196-201ENSMUST00000179161 110 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm28693-202ENSMUST00000190758 331 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm6458-201ENSMUST00000211573 635 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm7653-201ENSMUST00000214567 508 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.04□□□□□ -0.48
Nkx2-2P42586 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-2P42586 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.03□□□□□ -0.48
Nkx2-2P42586 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkx2-2P42586 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-2P42586 Gm8652-201ENSMUST00000181363 964 ntBASIC12.03□□□□□ -0.48
Nkx2-2P42586 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms