Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chd1P40201 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chd1P40201 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chd1P40201 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Chd1P40201 Gm28686-201ENSMUST00000187404 609 ntBASIC19.26■□□□□ 0.67
Chd1P40201 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chd1P40201 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1P40201 Gm26286-201ENSMUST00000104166 134 ntBASIC19.25■□□□□ 0.67
Chd1P40201 Gm14585-201ENSMUST00000120713 634 ntBASIC19.25■□□□□ 0.67
Chd1P40201 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC19.25■□□□□ 0.67
Chd1P40201 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Chd1P40201 Gm17798-201ENSMUST00000182282 1035 ntBASIC19.25■□□□□ 0.67
Chd1P40201 Gm3551-201ENSMUST00000190750 664 ntBASIC19.25■□□□□ 0.67
Chd1P40201 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC19.25■□□□□ 0.67
Chd1P40201 CT025553.1-201ENSMUST00000226292 299 ntBASIC19.25■□□□□ 0.67
Chd1P40201 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.25■□□□□ 0.67
Chd1P40201 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC19.25■□□□□ 0.67
Chd1P40201 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Chd1P40201 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.25■□□□□ 0.67
Chd1P40201 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Gm15036-201ENSMUST00000118880 400 ntBASIC19.25■□□□□ 0.67
Chd1P40201 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chd1P40201 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 CT025602.2-201ENSMUST00000226553 772 ntBASIC19.25■□□□□ 0.67
Chd1P40201 Gm25201-201ENSMUST00000083093 170 ntBASIC19.25■□□□□ 0.67
Chd1P40201 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1P40201 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Gm10710-201ENSMUST00000047876 3971 ntBASIC19.24■□□□□ 0.67
Chd1P40201 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Chd1P40201 Gm42629-201ENSMUST00000199063 1102 ntBASIC19.24■□□□□ 0.67
Chd1P40201 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC19.24■□□□□ 0.67
Chd1P40201 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1P40201 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Chd1P40201 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chd1P40201 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Gm6198-201ENSMUST00000191337 2929 ntBASIC19.23■□□□□ 0.67
Chd1P40201 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Gm12948-201ENSMUST00000119406 682 ntBASIC19.23■□□□□ 0.67
Chd1P40201 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Gm11836-201ENSMUST00000121022 441 ntBASIC19.23■□□□□ 0.67
Chd1P40201 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC19.23■□□□□ 0.67
Chd1P40201 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC19.23■□□□□ 0.67
Chd1P40201 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Gm40879-201ENSMUST00000220759 612 ntBASIC19.23■□□□□ 0.67
Chd1P40201 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Chd1P40201 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Gm5434-202ENSMUST00000222384 1451 ntBASIC19.23■□□□□ 0.67
Chd1P40201 Gm5434-201ENSMUST00000071825 1451 ntBASIC19.23■□□□□ 0.67
Chd1P40201 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC19.23■□□□□ 0.67
Chd1P40201 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1P40201 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms