Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Mir874-201ENSMUST00000104769 76 ntBASIC13.24□□□□□ -0.29
Fen1P39749 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.24□□□□□ -0.29
Fen1P39749 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Fen1P39749 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.24□□□□□ -0.29
Fen1P39749 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.24□□□□□ -0.29
Fen1P39749 Gm10253-201ENSMUST00000194270 940 ntBASIC13.24□□□□□ -0.29
Fen1P39749 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.24□□□□□ -0.29
Fen1P39749 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.24□□□□□ -0.29
Fen1P39749 Gm5779-201ENSMUST00000218467 910 ntBASIC13.24□□□□□ -0.29
Fen1P39749 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Fen1P39749 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Fen1P39749 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Fen1P39749 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.23□□□□□ -0.29
Fen1P39749 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Fen1P39749 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.23□□□□□ -0.29
Fen1P39749 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.23□□□□□ -0.29
Fen1P39749 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.23□□□□□ -0.29
Fen1P39749 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Fen1P39749 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Fen1P39749 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Fen1P39749 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fen1P39749 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
Fen1P39749 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fen1P39749 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.22□□□□□ -0.29
Fen1P39749 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.22□□□□□ -0.29
Fen1P39749 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fen1P39749 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.22□□□□□ -0.29
Fen1P39749 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.22□□□□□ -0.29
Fen1P39749 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.22□□□□□ -0.29
Fen1P39749 Gm15393-201ENSMUST00000120499 219 ntBASIC13.22□□□□□ -0.29
Fen1P39749 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms