Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Gm8213-201ENSMUST00000118191 441 ntBASIC12.6□□□□□ -0.39
Cdh4P39038 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdh4P39038 Gm27847-201ENSMUST00000183711 107 ntBASIC12.6□□□□□ -0.39
Cdh4P39038 Gm27375-201ENSMUST00000183799 107 ntBASIC12.6□□□□□ -0.39
Cdh4P39038 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.6□□□□□ -0.39
Cdh4P39038 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Gm8598-201ENSMUST00000221184 836 ntBASIC12.6□□□□□ -0.39
Cdh4P39038 Gm10012-201ENSMUST00000078252 192 ntBASIC12.6□□□□□ -0.39
Cdh4P39038 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdh4P39038 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdh4P39038 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.59□□□□□ -0.39
Cdh4P39038 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdh4P39038 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Gm14350-201ENSMUST00000116642 640 ntBASIC12.59□□□□□ -0.39
Cdh4P39038 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Gm17150-201ENSMUST00000165577 381 ntBASIC12.59□□□□□ -0.39
Cdh4P39038 Proscos-202ENSMUST00000178990 666 ntBASIC12.59□□□□□ -0.39
Cdh4P39038 Gm24196-201ENSMUST00000179161 110 ntBASIC12.59□□□□□ -0.39
Cdh4P39038 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.59□□□□□ -0.39
Cdh4P39038 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdh4P39038 Gm45841-201ENSMUST00000207700 164 ntBASIC12.59□□□□□ -0.39
Cdh4P39038 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdh4P39038 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdh4P39038 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdh4P39038 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdh4P39038 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh4P39038 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdh4P39038 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdh4P39038 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdh4P39038 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cdh4P39038 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdh4P39038 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Gm16202-201ENSMUST00000117532 544 ntBASIC12.58□□□□□ -0.4
Cdh4P39038 Gm11803-201ENSMUST00000119966 444 ntBASIC12.58□□□□□ -0.4
Cdh4P39038 Gm10156-201ENSMUST00000122364 462 ntBASIC12.58□□□□□ -0.4
Cdh4P39038 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Gm43433-201ENSMUST00000196573 481 ntBASIC12.58□□□□□ -0.4
Cdh4P39038 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdh4P39038 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdh4P39038 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh4P39038 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.58□□□□□ -0.4
Cdh4P39038 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh4P39038 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms