Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk2P38575 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.54□□□□□ -0.56
Upk2P38575 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk2P38575 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk2P38575 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Upk2P38575 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.54□□□□□ -0.56
Upk2P38575 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk2P38575 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Upk2P38575 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk2P38575 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.54□□□□□ -0.56
Upk2P38575 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk2P38575 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.54□□□□□ -0.56
Upk2P38575 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Upk2P38575 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Upk2P38575 Gm16202-201ENSMUST00000117532 544 ntBASIC11.53□□□□□ -0.56
Upk2P38575 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.53□□□□□ -0.56
Upk2P38575 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.53□□□□□ -0.56
Upk2P38575 Gm8515-201ENSMUST00000194852 576 ntBASIC11.53□□□□□ -0.56
Upk2P38575 Gm44069-201ENSMUST00000204898 506 ntBASIC11.53□□□□□ -0.56
Upk2P38575 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.53□□□□□ -0.56
Upk2P38575 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Upk2P38575 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.53□□□□□ -0.56
Upk2P38575 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Upk2P38575 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk2P38575 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Upk2P38575 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Upk2P38575 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk2P38575 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Upk2P38575 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Upk2P38575 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.52□□□□□ -0.57
Upk2P38575 Gm12091-201ENSMUST00000146791 830 ntBASIC11.52□□□□□ -0.57
Upk2P38575 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.52□□□□□ -0.57
Upk2P38575 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.52□□□□□ -0.57
Upk2P38575 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.52□□□□□ -0.57
Upk2P38575 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.52□□□□□ -0.57
Upk2P38575 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.52□□□□□ -0.57
Upk2P38575 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.52□□□□□ -0.57
Upk2P38575 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.52□□□□□ -0.57
Upk2P38575 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Upk2P38575 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.52□□□□□ -0.57
Upk2P38575 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Upk2P38575 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Upk2P38575 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.52□□□□□ -0.57
Upk2P38575 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Upk2P38575 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk2P38575 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Upk2P38575 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk2P38575 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Upk2P38575 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms