Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Foxa1P35582 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.16□□□□□ -0.46
Foxa1P35582 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Gm27486-201ENSMUST00000184923 80 ntBASIC12.16□□□□□ -0.46
Foxa1P35582 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Gm18041-201ENSMUST00000218210 618 ntBASIC12.16□□□□□ -0.46
Foxa1P35582 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.16□□□□□ -0.46
Foxa1P35582 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Foxa1P35582 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.15□□□□□ -0.46
Foxa1P35582 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Gm11814-201ENSMUST00000119515 929 ntBASIC12.15□□□□□ -0.46
Foxa1P35582 Gm10156-201ENSMUST00000122364 462 ntBASIC12.15□□□□□ -0.46
Foxa1P35582 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxa1P35582 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Foxa1P35582 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.15□□□□□ -0.46
Foxa1P35582 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.15□□□□□ -0.46
Foxa1P35582 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.15□□□□□ -0.46
Foxa1P35582 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Gm10012-201ENSMUST00000078252 192 ntBASIC12.15□□□□□ -0.46
Foxa1P35582 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Foxa1P35582 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Foxa1P35582 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxa1P35582 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Foxa1P35582 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Foxa1P35582 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Foxa1P35582 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.14□□□□□ -0.47
Foxa1P35582 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Foxa1P35582 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Foxa1P35582 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.14□□□□□ -0.47
Foxa1P35582 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Gm11618-201ENSMUST00000117946 267 ntBASIC12.14□□□□□ -0.47
Foxa1P35582 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.14□□□□□ -0.47
Foxa1P35582 Gm8213-201ENSMUST00000118191 441 ntBASIC12.14□□□□□ -0.47
Foxa1P35582 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms