Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.33□□□□□ -0.6
Slc6a1P31648 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.32□□□□□ -0.6
Slc6a1P31648 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.32□□□□□ -0.6
Slc6a1P31648 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Gm27920-201ENSMUST00000183953 96 ntBASIC11.32□□□□□ -0.6
Slc6a1P31648 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.32□□□□□ -0.6
Slc6a1P31648 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.32□□□□□ -0.6
Slc6a1P31648 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a1P31648 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.31□□□□□ -0.6
Slc6a1P31648 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.31□□□□□ -0.6
Slc6a1P31648 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Slc6a1P31648 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.31□□□□□ -0.6
Slc6a1P31648 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms