Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.03■□□□□ -0
Vcam1P29533 Gm5904-201ENSMUST00000210286 865 ntBASIC15.03■□□□□ -0
Vcam1P29533 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vcam1P29533 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vcam1P29533 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.03■□□□□ -0
Vcam1P29533 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.03■□□□□ -0
Vcam1P29533 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.03■□□□□ -0
Vcam1P29533 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vcam1P29533 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.03■□□□□ -0
Vcam1P29533 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vcam1P29533 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.02■□□□□ -0
Vcam1P29533 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vcam1P29533 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.02■□□□□ -0
Vcam1P29533 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vcam1P29533 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.02■□□□□ -0
Vcam1P29533 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Gm26956-201ENSMUST00000182176 986 ntBASIC15.02■□□□□ -0
Vcam1P29533 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.02■□□□□ -0
Vcam1P29533 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.02■□□□□ -0
Vcam1P29533 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.02■□□□□ -0
Vcam1P29533 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Vcam1P29533 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.02■□□□□ -0
Vcam1P29533 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vcam1P29533 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Vcam1P29533 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.02□□□□□ -0.01
Vcam1P29533 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Vcam1P29533 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Vcam1P29533 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vcam1P29533 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vcam1P29533 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vcam1P29533 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Vcam1P29533 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.01□□□□□ -0.01
Vcam1P29533 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.01□□□□□ -0.01
Vcam1P29533 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Vcam1P29533 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vcam1P29533 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.01□□□□□ -0.01
Vcam1P29533 Gm31256-201ENSMUST00000194705 506 ntBASIC15.01□□□□□ -0.01
Vcam1P29533 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms