Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nckap1P28660 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.1□□□□□ -0.31
Nckap1P28660 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nckap1P28660 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Nckap1P28660 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nckap1P28660 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.09□□□□□ -0.31
Nckap1P28660 Gm25261-201ENSMUST00000157416 134 ntBASIC13.09□□□□□ -0.31
Nckap1P28660 Gm4768-201ENSMUST00000206199 686 ntBASIC13.09□□□□□ -0.31
Nckap1P28660 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.09□□□□□ -0.31
Nckap1P28660 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.09□□□□□ -0.31
Nckap1P28660 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.09□□□□□ -0.31
Nckap1P28660 Gm19163-201ENSMUST00000223313 780 ntBASIC13.09□□□□□ -0.31
Nckap1P28660 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nckap1P28660 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nckap1P28660 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Nckap1P28660 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.09□□□□□ -0.31
Nckap1P28660 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.09□□□□□ -0.31
Nckap1P28660 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.09□□□□□ -0.31
Nckap1P28660 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nckap1P28660 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nckap1P28660 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nckap1P28660 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nckap1P28660 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.08□□□□□ -0.31
Nckap1P28660 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nckap1P28660 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.08□□□□□ -0.31
Nckap1P28660 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nckap1P28660 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.08□□□□□ -0.32
Nckap1P28660 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.08□□□□□ -0.32
Nckap1P28660 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Gm27516-201ENSMUST00000184237 98 ntBASIC13.08□□□□□ -0.32
Nckap1P28660 Gm43118-201ENSMUST00000199149 775 ntBASIC13.08□□□□□ -0.32
Nckap1P28660 Gm9368-201ENSMUST00000219348 831 ntBASIC13.08□□□□□ -0.32
Nckap1P28660 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.08□□□□□ -0.32
Nckap1P28660 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.08□□□□□ -0.32
Nckap1P28660 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nckap1P28660 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Matn2-206ENSMUST00000228570 2798 ntBASIC13.08□□□□□ -0.32
Nckap1P28660 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nckap1P28660 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Nckap1P28660 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.07□□□□□ -0.32
Nckap1P28660 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Nckap1P28660 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.07□□□□□ -0.32
Nckap1P28660 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Gm12241-201ENSMUST00000118330 726 ntBASIC13.07□□□□□ -0.32
Nckap1P28660 Gm11793-201ENSMUST00000120433 981 ntBASIC13.07□□□□□ -0.32
Nckap1P28660 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.07□□□□□ -0.32
Nckap1P28660 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nckap1P28660 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms