Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afxP27661 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
H2afxP27661 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afxP27661 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.71□□□□□ -0.22
H2afxP27661 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
H2afxP27661 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
H2afxP27661 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.71□□□□□ -0.22
H2afxP27661 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
H2afxP27661 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afxP27661 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
H2afxP27661 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Gm13385-201ENSMUST00000121089 220 ntBASIC13.7□□□□□ -0.22
H2afxP27661 Gm27459-201ENSMUST00000184860 107 ntBASIC13.7□□□□□ -0.22
H2afxP27661 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
H2afxP27661 Gm10060-201ENSMUST00000212002 111 ntBASIC13.7□□□□□ -0.22
H2afxP27661 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.7□□□□□ -0.22
H2afxP27661 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
H2afxP27661 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
H2afxP27661 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.7□□□□□ -0.22
H2afxP27661 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afxP27661 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.69□□□□□ -0.22
H2afxP27661 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.69□□□□□ -0.22
H2afxP27661 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afxP27661 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.69□□□□□ -0.22
H2afxP27661 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Gm2810-201ENSMUST00000118681 990 ntBASIC13.69□□□□□ -0.22
H2afxP27661 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
H2afxP27661 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.69□□□□□ -0.22
H2afxP27661 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
H2afxP27661 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
H2afxP27661 Gm34391-201ENSMUST00000203706 907 ntBASIC13.69□□□□□ -0.22
H2afxP27661 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
H2afxP27661 Birc2-201ENSMUST00000054878 378 ntBASIC13.69□□□□□ -0.22
H2afxP27661 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.69□□□□□ -0.22
H2afxP27661 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
H2afxP27661 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
H2afxP27661 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H2afxP27661 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afxP27661 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.68□□□□□ -0.22
H2afxP27661 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.68□□□□□ -0.22
H2afxP27661 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.68□□□□□ -0.22
H2afxP27661 Gm20553-201ENSMUST00000204205 844 ntBASIC13.68□□□□□ -0.22
H2afxP27661 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.68□□□□□ -0.22
H2afxP27661 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Gm15590-201ENSMUST00000078419 552 ntBASIC13.68□□□□□ -0.22
H2afxP27661 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afxP27661 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms