Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb9P20615 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb9P20615 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb9P20615 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb9P20615 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb9P20615 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb9P20615 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.59□□□□□ -0.39
Hoxb9P20615 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Hoxb9P20615 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxb9P20615 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb9P20615 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxb9P20615 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxb9P20615 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.58□□□□□ -0.4
Hoxb9P20615 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Gm8213-201ENSMUST00000118191 441 ntBASIC12.58□□□□□ -0.4
Hoxb9P20615 Gm11803-201ENSMUST00000119966 444 ntBASIC12.58□□□□□ -0.4
Hoxb9P20615 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.58□□□□□ -0.4
Hoxb9P20615 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxb9P20615 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Gm28693-202ENSMUST00000190758 331 ntBASIC12.58□□□□□ -0.4
Hoxb9P20615 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxb9P20615 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Gm10012-201ENSMUST00000078252 192 ntBASIC12.58□□□□□ -0.4
Hoxb9P20615 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb9P20615 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb9P20615 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb9P20615 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb9P20615 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb9P20615 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb9P20615 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.58□□□□□ -0.4
Hoxb9P20615 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.57□□□□□ -0.4
Hoxb9P20615 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm11618-201ENSMUST00000117946 267 ntBASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm13123-201ENSMUST00000122173 492 ntBASIC12.57□□□□□ -0.4
Hoxb9P20615 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm6244-201ENSMUST00000178732 841 ntBASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm24196-201ENSMUST00000179161 110 ntBASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxb9P20615 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb9P20615 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb9P20615 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb9P20615 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb9P20615 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb9P20615 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb9P20615 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.56□□□□□ -0.4
Hoxb9P20615 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb9P20615 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms