Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TP20293 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TP20293 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TP20293 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TP20293 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TP20293 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TP20293 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
TP20293 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
TP20293 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.4□□□□□ -0.42
TP20293 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Gm14928-201ENSMUST00000120198 477 ntBASIC12.4□□□□□ -0.42
TP20293 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.4□□□□□ -0.42
TP20293 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TP20293 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.4□□□□□ -0.42
TP20293 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TP20293 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.4□□□□□ -0.42
TP20293 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TP20293 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TP20293 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.4□□□□□ -0.42
TP20293 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TP20293 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TP20293 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
TP20293 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TP20293 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TP20293 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TP20293 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TP20293 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.39□□□□□ -0.43
TP20293 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
TP20293 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.39□□□□□ -0.43
TP20293 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
TP20293 Gm27701-201ENSMUST00000184498 110 ntBASIC12.39□□□□□ -0.43
TP20293 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.39□□□□□ -0.43
TP20293 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.39□□□□□ -0.43
TP20293 Gm42550-201ENSMUST00000201553 960 ntBASIC12.39□□□□□ -0.43
TP20293 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TP20293 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.39□□□□□ -0.43
TP20293 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.39□□□□□ -0.43
TP20293 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TP20293 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.39□□□□□ -0.43
TP20293 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.39□□□□□ -0.43
TP20293 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.39□□□□□ -0.43
TP20293 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
TP20293 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TP20293 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.38□□□□□ -0.43
TP20293 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TP20293 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TP20293 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.38□□□□□ -0.43
TP20293 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TP20293 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.38□□□□□ -0.43
TP20293 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TP20293 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TP20293 Gm15678-201ENSMUST00000117573 960 ntBASIC12.38□□□□□ -0.43
TP20293 Gm13689-201ENSMUST00000119360 685 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms