Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ApoeP08226 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.46□□□□□ -0.42
ApoeP08226 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.46□□□□□ -0.42
ApoeP08226 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.45□□□□□ -0.42
ApoeP08226 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm12403-201ENSMUST00000121384 959 ntBASIC12.45□□□□□ -0.42
ApoeP08226 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.45□□□□□ -0.42
ApoeP08226 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm44335-201ENSMUST00000196879 141 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm44297-201ENSMUST00000198304 141 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Gm44346-201ENSMUST00000198851 141 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.45□□□□□ -0.42
ApoeP08226 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.45□□□□□ -0.42
ApoeP08226 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ApoeP08226 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ApoeP08226 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
ApoeP08226 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ApoeP08226 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Gm15693-201ENSMUST00000120470 637 ntBASIC12.44□□□□□ -0.42
ApoeP08226 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.44□□□□□ -0.42
ApoeP08226 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ApoeP08226 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ApoeP08226 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.44□□□□□ -0.42
ApoeP08226 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.44□□□□□ -0.42
ApoeP08226 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.44□□□□□ -0.42
ApoeP08226 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ApoeP08226 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ApoeP08226 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms